IL_4V71_024

3D structure

PDB id

4V71 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

AAG*CU

Length

5 nucleotides

Bulged bases

4V71|1|AA|A|461

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V71_024 not in the Motif Atlas

Geometric match to IL_2VPL_002

Geometric discrepancy: 0.2975

The information below is about IL_2VPL_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

4V71|1|AA|A|460
4V71|1|AA|A|461
4V71|1|AA|G|462
*
4V71|1|AA|C|470
4V71|1|AA|U|471

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16