3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
GUGG*CUGC
Length
8 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V72_193 not in the Motif Atlas
Geometric match to IL_7R9F_001
Geometric discrepancy: 0.3183
The information below is about IL_7R9F_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_25872.4
Basepair signature
cWW-cWW-cWH-cWW
Number of instances in this motif group
5

Unit IDs

4V72|1|BA|G|2138
4V72|1|BA|U|2139
4V72|1|BA|G|2140
4V72|1|BA|G|2141
*
4V72|1|BA|C|2150
4V72|1|BA|U|2151
4V72|1|BA|G|2152
4V72|1|BA|C|2153

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain AK
30S ribosomal protein S11
Chain B5
50S ribosomal protein L1

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.3737 s
Application loaded.