3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
UGAAAUCC*GAACUG
Length
14 nucleotides
Bulged bases
4V74|1|AA|U|632
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V74_031 not in the Motif Atlas
Homologous match to IL_5J7L_030
Geometric discrepancy: 0.4315
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

4V74|1|AA|U|605
4V74|1|AA|G|606
4V74|1|AA|A|607
4V74|1|AA|A|608
4V74|1|AA|A|609
4V74|1|AA|U|610
4V74|1|AA|C|611
4V74|1|AA|C|612
*
4V74|1|AA|G|628
4V74|1|AA|A|629
4V74|1|AA|A|630
4V74|1|AA|C|631
4V74|1|AA|U|632
4V74|1|AA|G|633

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AD
30S ribosomal protein S4
Chain AH
30S ribosomal protein S8
Chain AP
30S ribosomal protein S16
Chain AQ
30S ribosomal protein S17

Coloring options:


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