IL_4V74_031

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGAAAUCC*GAACUG

Length

14 nucleotides

Bulged bases

4V74|1|AA|U|632

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_031 not in the Motif Atlas

Homologous match to IL_5J7L_030

Geometric discrepancy: 0.4315

The information below is about IL_5J7L_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.3

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4V74|1|AA|U|605
4V74|1|AA|G|606
4V74|1|AA|A|607
4V74|1|AA|A|608
4V74|1|AA|A|609
4V74|1|AA|U|610
4V74|1|AA|C|611
4V74|1|AA|C|612
*
4V74|1|AA|G|628
4V74|1|AA|A|629
4V74|1|AA|A|630
4V74|1|AA|C|631
4V74|1|AA|U|632
4V74|1|AA|G|633

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4

Chain AH

30S ribosomal protein S8

Chain AP

30S ribosomal protein S16

Chain AQ

30S ribosomal protein S17