3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GAAAC*GAGAUAGC
Length
13 nucleotides
Bulged bases
4V74|1|BA|G|801, 4V74|1|BA|G|805
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V74_082 not in the Motif Atlas
Geometric match to IL_5TBW_028
Geometric discrepancy: 0.2275
The information below is about IL_5TBW_028
Detailed Annotation
tHW-tHW cross-strand stack
Broad Annotation
No text annotation
Motif group
IL_17470.7
Basepair signature
cWW-tWW-L-R-tWH-L-cWW
Number of instances in this motif group
7

Unit IDs

4V74|1|BA|G|674
4V74|1|BA|A|675
4V74|1|BA|A|676
4V74|1|BA|A|677
4V74|1|BA|C|678
*
4V74|1|BA|G|799
4V74|1|BA|A|800
4V74|1|BA|G|801
4V74|1|BA|A|802
4V74|1|BA|U|803
4V74|1|BA|A|804
4V74|1|BA|G|805
4V74|1|BA|C|806

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BE
50S ribosomal protein L4
Chain BL
50S ribosomal protein L15

Coloring options:


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