IL_4V75_168

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UGUUC*GGUAG

Length

10 nucleotides

Bulged bases

4V75|1|BA|U|2689, 4V75|1|BA|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V75_168 not in the Motif Atlas

Homologous match to IL_5J7L_348

Geometric discrepancy: 0.1729

The information below is about IL_5J7L_348

Detailed Annotation

UAA/GAN related, with intercalation

Broad Annotation

UAA/GAN related, with intercalation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

4V75|1|BA|U|2687
4V75|1|BA|G|2688
4V75|1|BA|U|2689
4V75|1|BA|U|2690
4V75|1|BA|C|2691
*
4V75|1|BA|G|2718
4V75|1|BA|G|2719
4V75|1|BA|U|2720
4V75|1|BA|A|2721
4V75|1|BA|G|2722

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BN

50S ribosomal protein L17

Chain BP

50S ribosomal protein L19