IL_4V76_092

3D structure

PDB id

4V76 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UUUC*GAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V76_092 not in the Motif Atlas

Geometric match to IL_5C5W_001

Geometric discrepancy: 0.2594

The information below is about IL_5C5W_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

4V76|1|BA|U|870
4V76|1|BA|U|871
4V76|1|BA|U|872
4V76|1|BA|C|873
*
4V76|1|BA|G|904
4V76|1|BA|A|905
4V76|1|BA|U|906
4V76|1|BA|G|907

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16