3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
AGAAUU*AGGAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V7A_037 not in the Motif Atlas
Homologous match to IL_5J7L_034
Geometric discrepancy: 0.3133
The information below is about IL_5J7L_034
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

4V7A|1|AA|A|673
4V7A|1|AA|G|674
4V7A|1|AA|A|675
4V7A|1|AA|A|676
4V7A|1|AA|U|677
4V7A|1|AA|U|678
*
4V7A|1|AA|A|712
4V7A|1|AA|G|713
4V7A|1|AA|G|714
4V7A|1|AA|A|715
4V7A|1|AA|A|716
4V7A|1|AA|U|717

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain BC
50S ribosomal protein L2

Coloring options:


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