IL_4V7D_114

3D structure

PDB id

4V7D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

AUCACU*AAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7D_114 not in the Motif Atlas

Geometric match to IL_5TBW_062

Geometric discrepancy: 0.3321

The information below is about IL_5TBW_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51005.1

Basepair signature

cWW-L-R-tWH-cWW-L-L

Number of instances in this motif group

2

Unit IDs

4V7D|1|AA|A|2679
4V7D|1|AA|U|2680
4V7D|1|AA|C|2681
4V7D|1|AA|A|2682
4V7D|1|AA|C|2683
4V7D|1|AA|U|2684
*
4V7D|1|AA|A|2725
4V7D|1|AA|A|2726
4V7D|1|AA|A|2727
4V7D|1|AA|U|2728

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AN

50S ribosomal protein L14

Chain AS

50S ribosomal protein L19