IL_4V7E_036
3D structure
- PDB id
- 4V7E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.5 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 4V7E|1|Aa|G|911, 4V7E|1|Aa|A|923, 4V7E|1|Aa|A|924
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7E_036 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.1295
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V7E|1|Aa|G|910
4V7E|1|Aa|G|911
4V7E|1|Aa|G|912
*
4V7E|1|Aa|U|922
4V7E|1|Aa|A|923
4V7E|1|Aa|A|924
4V7E|1|Aa|U|925
4V7E|1|Aa|C|926
Current chains
- Chain Aa
- 60S ribosomal RNA
Nearby chains
- Chain CA
- 60S ribosomal protein L2
- Chain CN
- 60S ribosomal protein L15E
- Chain CP
- 60S ribosomal protein L22
- Chain Cj
- 60S ribosomal protein L37E
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