IL_4V7R_018
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UAUCAA*UUUCAACG
- Length
- 14 nucleotides
- Bulged bases
- 4V7R|1|A1|U|313, 4V7R|1|A1|C|351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_018 not in the Motif Atlas
- Homologous match to IL_4V88_402
- Geometric discrepancy: 0.1571
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
4V7R|1|A1|U|311
4V7R|1|A1|A|312
4V7R|1|A1|U|313
4V7R|1|A1|C|314
4V7R|1|A1|A|315
4V7R|1|A1|A|316
*
4V7R|1|A1|U|348
4V7R|1|A1|U|349
4V7R|1|A1|U|350
4V7R|1|A1|C|351
4V7R|1|A1|A|352
4V7R|1|A1|A|353
4V7R|1|A1|C|354
4V7R|1|A1|G|355
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain AF
- 40S ribosomal protein S11
- Chain AP
- 40S ribosomal protein S23
Coloring options: