IL_4V7R_288
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CGUAG*UCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_288 not in the Motif Atlas
- Homologous match to IL_4V88_418
- Geometric discrepancy: 0.165
- The information below is about IL_4V88_418
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V7R|1|C1|C|627
4V7R|1|C1|G|628
4V7R|1|C1|U|629
4V7R|1|C1|A|630
4V7R|1|C1|G|631
*
4V7R|1|C1|U|968
4V7R|1|C1|C|969
4V7R|1|C1|A|970
4V7R|1|C1|A|971
4V7R|1|C1|G|972
Current chains
- Chain C1
- 18S ribosomal RNA
Nearby chains
- Chain CF
- 40S ribosomal protein S11
- Chain CG
- 40S ribosomal protein S13
- Chain CP
- 40S ribosomal protein S23
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
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