IL_4V7R_431
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CGGAAUU*GGAGAUG
- Length
- 14 nucleotides
- Bulged bases
- 4V7R|1|D1|A|1729
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7R_431 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.5607
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V7R|1|D1|C|1711
4V7R|1|D1|G|1712
4V7R|1|D1|G|1713
4V7R|1|D1|A|1714
4V7R|1|D1|A|1715
4V7R|1|D1|U|1716
4V7R|1|D1|U|1717
*
4V7R|1|D1|G|1727
4V7R|1|D1|G|1728
4V7R|1|D1|A|1729
4V7R|1|D1|G|1730
4V7R|1|D1|A|1731
4V7R|1|D1|U|1732
4V7R|1|D1|G|1733
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain CG
- 40S ribosomal protein S13
- Chain DS
- 60S ribosomal protein L19
- Chain DZ
- 60S ribosomal protein L30
- Chain Dg
- 60S ribosomal protein L43
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