IL_4V8E_221
3D structure
- PDB id
- 4V8E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4V8E|1|CA|A|1203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8E_221 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0998
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
4V8E|1|CA|C|1045
4V8E|1|CA|U|1046
4V8E|1|CA|A|1047
4V8E|1|CA|A|1048
4V8E|1|CA|G|1049
*
4V8E|1|CA|C|1200
4V8E|1|CA|G|1201
4V8E|1|CA|A|1202
4V8E|1|CA|A|1203
4V8E|1|CA|G|1204
Current chains
- Chain CA
- RNA (2912-MER)
Nearby chains
- Chain C1
- 50S ribosomal protein L20
- Chain C2
- 50S ribosomal protein L21
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CX
- 50S ribosomal protein L30
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