IL_4V8J_029
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GAGAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- 4V8J|1|AA|A|648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_029 not in the Motif Atlas
- Homologous match to IL_4LFB_029
- Geometric discrepancy: 0.0852
- The information below is about IL_4LFB_029
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
4V8J|1|AA|G|645
4V8J|1|AA|A|646
4V8J|1|AA|G|647
4V8J|1|AA|A|648
4V8J|1|AA|G|649
*
4V8J|1|AA|U|723
4V8J|1|AA|G|724
4V8J|1|AA|G|725
4V8J|1|AA|U|726
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AO
- 30S ribosomal protein S15
- Chain AR
- 30S ribosomal protein S18
Coloring options: