IL_4V8J_030
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAAUU*AGGAAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8J_030 not in the Motif Atlas
- Homologous match to IL_5J7L_034
- Geometric discrepancy: 0.0866
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V8J|1|AA|G|656
4V8J|1|AA|G|657
4V8J|1|AA|A|658
4V8J|1|AA|A|659
4V8J|1|AA|U|660
4V8J|1|AA|U|661
*
4V8J|1|AA|A|695
4V8J|1|AA|G|696
4V8J|1|AA|G|697
4V8J|1|AA|A|698
4V8J|1|AA|A|699
4V8J|1|AA|C|700
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AF
- 30S ribosomal protein S6
- Chain AK
- 30S ribosomal protein S11
- Chain AR
- 30S ribosomal protein S18
- Chain BD
- 50S ribosomal protein L2
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