IL_4V9C_097
3D structure
- PDB id
- 4V9C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Allosteric control of the ribosome by small-molecule antibiotics
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 4V9C|1|BA|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9C_097 not in the Motif Atlas
- Homologous match to IL_7A0S_004
- Geometric discrepancy: 0.4267
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
4V9C|1|BA|G|81
4V9C|1|BA|U|82
4V9C|1|BA|A|83
4V9C|1|BA|A|84
4V9C|1|BA|G|85
*
4V9C|1|BA|C|97
4V9C|1|BA|G|98
4V9C|1|BA|U|99
4V9C|1|BA|U|100
4V9C|1|BA|A|101
4V9C|1|BA|U|102
4V9C|1|BA|A|103
4V9C|1|BA|A|104
4V9C|1|BA|C|105
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BU
- 50S ribosomal protein L24
- Chain BY
- 50S ribosomal protein L29
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