IL_4V9C_124
3D structure
- PDB id
- 4V9C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Allosteric control of the ribosome by small-molecule antibiotics
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AGCACU*AAACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9C_124 not in the Motif Atlas
- Geometric match to IL_5TBW_062
- Geometric discrepancy: 0.3591
- The information below is about IL_5TBW_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51005.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
4V9C|1|BA|A|863
4V9C|1|BA|G|864
4V9C|1|BA|C|865
4V9C|1|BA|A|866
4V9C|1|BA|C|867
4V9C|1|BA|U|868
*
4V9C|1|BA|A|909
4V9C|1|BA|A|910
4V9C|1|BA|A|911
4V9C|1|BA|C|912
4V9C|1|BA|U|913
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BM
- 50S ribosomal protein L16
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