IL_4V9I_144
3D structure
- PDB id
- 4V9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGC*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CGC,GCG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V9I_144 not in the Motif Atlas
- Geometric match to IL_4WZM_001
- Geometric discrepancy: 0.218
- The information below is about IL_4WZM_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- Isolated cWH basepair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4V9I|1|BA|C|2124
4V9I|1|BA|G|2125
4V9I|1|BA|C|2126
*
4V9I|1|BA|G|2205
4V9I|1|BA|C|2206
4V9I|1|BA|G|2207
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: