IL_4W29_265
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CCU*AGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CCU,AGG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_265 not in the Motif Atlas
- Homologous match to IL_5E81_371
- Geometric discrepancy: 0.5148
- The information below is about IL_5E81_371
- Detailed Annotation
- Self complementary
- Broad Annotation
- Self complementary
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4W29|1|CX|C|27
4W29|1|CX|C|28
4W29|1|CX|U|29
*
4W29|1|CX|A|41
4W29|1|CX|G|42
4W29|1|CX|G|43
Current chains
- Chain CX
- tRNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CM
- 30S ribosomal protein S13
- Chain CW
- Transfer RNA; tRNA
- Chain CY
- Elongation factor G
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