IL_4W29_314
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 4W29|1|DA|U|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4W29_314 not in the Motif Atlas
- Homologous match to IL_7A0S_043
- Geometric discrepancy: 0.3025
- The information below is about IL_7A0S_043
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.7
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
4W29|1|DA|C|1208
4W29|1|DA|G|1209
4W29|1|DA|A|1210
4W29|1|DA|U|1211
4W29|1|DA|G|1212
4W29|1|DA|A|1213
4W29|1|DA|A|1214
4W29|1|DA|G|1215
*
4W29|1|DA|U|1234
4W29|1|DA|G|1235
4W29|1|DA|G|1236
4W29|1|DA|A|1237
4W29|1|DA|G|1238
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DU
- 50S ribosomal protein L20
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