IL_4WQY_339

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAG*CUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CUAG,CUAG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WQY_339 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.3399

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

4WQY|1|DA|C|999
4WQY|1|DA|U|1000
4WQY|1|DA|A|1001
4WQY|1|DA|G|1001|||A
*
4WQY|1|DA|C|1039
4WQY|1|DA|U|1040
4WQY|1|DA|A|1041
4WQY|1|DA|G|1042

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains