IL_4WT8_083
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 4WT8|1|Bb|A|516, 4WT8|1|Bb|U|518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4WT8_083 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1491
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4WT8|1|Bb|G|499
4WT8|1|Bb|U|500
4WT8|1|Bb|G|501
4WT8|1|Bb|C|502
4WT8|1|Bb|C|503
4WT8|1|Bb|A|504
4WT8|1|Bb|G|505
*
4WT8|1|Bb|C|512
4WT8|1|Bb|G|513
4WT8|1|Bb|G|514
4WT8|1|Bb|U|515
4WT8|1|Bb|A|516
4WT8|1|Bb|A|517
4WT8|1|Bb|U|518
4WT8|1|Bb|A|519
4WT8|1|Bb|C|520
Current chains
- Chain Bb
- RNA (1504-MER)
Nearby chains
- Chain B2
- mRNA
- Chain BC
- 30S ribosomal protein S3
- Chain BL
- 30S ribosomal protein S12
- Chain DV
- Transfer RNA; tRNA
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