IL_4WWW_271

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4WWW_271 not in the Motif Atlas

Geometric match to IL_5Z1I_002

Geometric discrepancy: 0.2959

The information below is about IL_5Z1I_002

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

4WWW|1|YA|C|378
4WWW|1|YA|G|379
4WWW|1|YA|G|380
*
4WWW|1|YA|C|394
4WWW|1|YA|U|395
4WWW|1|YA|G|396

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YX

50S ribosomal protein L28