IL_4XEJ_153
3D structure
- PDB id
- 4XEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- IRES bound to bacterial Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4XEJ_153 not in the Motif Atlas
- Geometric match to IL_5J7L_257
- Geometric discrepancy: 0.2412
- The information below is about IL_5J7L_257
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4XEJ|1|A23S|C|2108
4XEJ|1|A23S|U|2109
4XEJ|1|A23S|G|2110
*
4XEJ|1|A23S|C|2179
4XEJ|1|A23S|U|2180
4XEJ|1|A23S|G|2181
Current chains
- Chain A23S
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: