IL_5MMI_035
3D structure
- PDB id
- 5MMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the chloroplast ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 5MMI|1|A|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5MMI_035 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0695
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
5MMI|1|A|C|1026
5MMI|1|A|U|1027
5MMI|1|A|A|1028
5MMI|1|A|A|1029
5MMI|1|A|G|1030
*
5MMI|1|A|C|1180
5MMI|1|A|G|1181
5MMI|1|A|A|1182
5MMI|1|A|A|1183
5MMI|1|A|G|1184
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein 6, chloroplastic
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain R
- 50S ribosomal protein L20, chloroplastic
Coloring options: