IL_5TZS_025
3D structure
- PDB id
- 5TZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Architecture of the yeast small subunit processome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 5TZS|1|1|C|1158, 5TZS|1|1|C|1159
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5TZS_025 not in the Motif Atlas
- Homologous match to IL_4V88_443
- Geometric discrepancy: 0.0006
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
5TZS|1|1|A|1157
5TZS|1|1|C|1158
5TZS|1|1|C|1159
5TZS|1|1|A|1160
*
5TZS|1|1|U|1617
5TZS|1|1|C|1618
5TZS|1|1|C|1619
5TZS|1|1|C|1620
5TZS|1|1|U|1621
Current chains
- Chain 1
- 18S ribosomal RNA
Nearby chains
- Chain 6
- rpS5_US7
- Chain G
- rpS28_eS28
- Chain Q
- Utp12
- Chain m
- Imp4
Coloring options: