IL_6AWC_034
3D structure
- PDB id
- 6AWC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 6AWC|1|A|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWC_034 not in the Motif Atlas
- Homologous match to IL_6CZR_141
- Geometric discrepancy: 0.2996
- The information below is about IL_6CZR_141
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
6AWC|1|A|U|662
6AWC|1|A|A|663
6AWC|1|A|G|664
6AWC|1|A|A|665
6AWC|1|A|G|666
*
6AWC|1|A|U|740
6AWC|1|A|G|741
6AWC|1|A|G|742
6AWC|1|A|A|743
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S6
- Chain R
- 30S ribosomal protein S15
- Chain U
- 30S ribosomal protein S18
- Chain X
- 30S ribosomal protein S21
Coloring options: