IL_6AWD_030
3D structure
- PDB id
- 6AWD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.1 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 6AWD|1|A|U|632
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AWD_030 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.2976
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6AWD|1|A|U|605
6AWD|1|A|G|606
6AWD|1|A|A|607
6AWD|1|A|A|608
6AWD|1|A|A|609
6AWD|1|A|U|610
6AWD|1|A|C|611
6AWD|1|A|C|612
*
6AWD|1|A|G|628
6AWD|1|A|A|629
6AWD|1|A|A|630
6AWD|1|A|C|631
6AWD|1|A|U|632
6AWD|1|A|G|633
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S4
- Chain K
- 30S ribosomal protein S8
- Chain S
- 30S ribosomal protein S16
Coloring options: