IL_6AZ1_027
3D structure
- PDB id
- 6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUU(A2M)AAG*UC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6AZ1_027 not in the Motif Atlas
- Homologous match to IL_4V88_416
- Geometric discrepancy: 0.1621
- The information below is about IL_4V88_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
6AZ1|1|1|G|665
6AZ1|1|1|U|666
6AZ1|1|1|U|667
6AZ1|1|1|A2M|668
6AZ1|1|1|A|669
6AZ1|1|1|A|670
6AZ1|1|1|G|671
*
6AZ1|1|1|U|1456
6AZ1|1|1|C|1457
Current chains
- Chain 1
- ribosomal RNA 18S
Nearby chains
- Chain P
- ribosomal protein S12
- Chain b
- ribosomal protein S26e
Coloring options: