IL_6BY1_009
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- GGAAA*UGCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BY1_009 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.3051
- The information below is about IL_1GID_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
6BY1|1|AA|G|127
6BY1|1|AA|G|128
6BY1|1|AA|A|129
6BY1|1|AA|A|130
6BY1|1|AA|A|131
*
6BY1|1|AA|U|231
6BY1|1|AA|G|232
6BY1|1|AA|C|233
6BY1|1|AA|C|234
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AQ
- 30S ribosomal protein S17
- Chain AT
- 30S ribosomal protein S20
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