IL_6BY1_260
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6BY1|1|DA|G|776, 6BY1|1|DA|A|788, 6BY1|1|DA|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6BY1_260 not in the Motif Atlas
- Homologous match to IL_4WF9_027
- Geometric discrepancy: 0.1613
- The information below is about IL_4WF9_027
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6BY1|1|DA|G|775
6BY1|1|DA|G|776
6BY1|1|DA|G|777
*
6BY1|1|DA|C|787
6BY1|1|DA|A|788
6BY1|1|DA|A|789
6BY1|1|DA|U|790
6BY1|1|DA|C|791
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D3
- 50S ribosomal protein L34
- Chain DC
- 50S ribosomal protein L2
- Chain DE
- 50S ribosomal protein L4
- Chain DS
- 50S ribosomal protein L22
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