IL_6EK0_204
3D structure
- PDB id
- 6EK0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution cryo-EM structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUU(A2M)AAA*UC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6EK0_204 not in the Motif Atlas
- Homologous match to IL_4V88_416
- Geometric discrepancy: 0.1356
- The information below is about IL_4V88_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
6EK0|1|S2|G|665
6EK0|1|S2|U|666
6EK0|1|S2|U|667
6EK0|1|S2|A2M|668
6EK0|1|S2|A|669
6EK0|1|S2|A|670
6EK0|1|S2|A|671
*
6EK0|1|S2|U|1161
6EK0|1|S2|C|1162
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23
- Chain Sa
- 40S ribosomal protein S26
Coloring options: