IL_6ELZ_111
3D structure
- PDB id
- 6ELZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGUA*UCUG
- Length
- 9 nucleotides
- Bulged bases
- 6ELZ|1|1|U|3341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ELZ_111 not in the Motif Atlas
- Geometric match to IL_1GID_008
- Geometric discrepancy: 0.2344
- The information below is about IL_1GID_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 36
Unit IDs
6ELZ|1|1|C|3338
6ELZ|1|1|A|3339
6ELZ|1|1|G|3340
6ELZ|1|1|U|3341
6ELZ|1|1|A|3342
*
6ELZ|1|1|U|3363
6ELZ|1|1|C|3364
6ELZ|1|1|U|3365
6ELZ|1|1|G|3366
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain u
- Ribosome biogenesis protein RLP24
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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