IL_6FRK_166
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUU*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 6FRK|1|5|G|5049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6FRK_166 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.252
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6FRK|1|5|G|5000
6FRK|1|5|U|5001
6FRK|1|5|U|5002
*
6FRK|1|5|G|5045
6FRK|1|5|U|5046
6FRK|1|5|C|5047
6FRK|1|5|A|5048
6FRK|1|5|G|5049
6FRK|1|5|C|5050
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain W
- Ribosomal protein eL24
- Chain d
- Ribosomal protein eL31
Coloring options: