IL_6GC0_119
3D structure
- PDB id
- 6GC0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UCACUG*UAAA
- Length
- 10 nucleotides
- Bulged bases
- 6GC0|1|A|A|2726
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GC0_119 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.343
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6GC0|1|A|U|2680
6GC0|1|A|C|2681
6GC0|1|A|A|2682
6GC0|1|A|C|2683
6GC0|1|A|U|2684
6GC0|1|A|G|2685
*
6GC0|1|A|U|2724
6GC0|1|A|A|2725
6GC0|1|A|A|2726
6GC0|1|A|A|2727
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain N
- 50S ribosomal protein L17
- Chain P
- 50S ribosomal protein L19
Coloring options: