IL_6GZZ_339
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGGUGA*UACCC
- Length
- 11 nucleotides
- Bulged bases
- 6GZZ|1|A3|G|31
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6GZZ_339 not in the Motif Atlas
- Geometric match to IL_8P9A_349
- Geometric discrepancy: 0.3979
- The information below is about IL_8P9A_349
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
6GZZ|1|A3|G|27
6GZZ|1|A3|G|28
6GZZ|1|A3|G|29
6GZZ|1|A3|U|30
6GZZ|1|A3|G|31
6GZZ|1|A3|A|32
*
6GZZ|1|A3|U|535
6GZZ|1|A3|A|536
6GZZ|1|A3|C|537
6GZZ|1|A3|C|538
6GZZ|1|A3|C|539
Current chains
- Chain A3
- 16S ribosomal RNA
Nearby chains
- Chain D3
- 30S ribosomal protein S4
- Chain L3
- 30S ribosomal protein S12
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