IL_6HRM_060
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- AAGAAG*CCACU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_060 not in the Motif Atlas
- Homologous match to IL_5J7L_063
- Geometric discrepancy: 0.0862
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HRM|1|1|A|1430
6HRM|1|1|A|1431
6HRM|1|1|G|1432
6HRM|1|1|A|1433
6HRM|1|1|A|1434
6HRM|1|1|G|1435
*
6HRM|1|1|C|4382
6HRM|1|1|C|4383
6HRM|1|1|A|4384
6HRM|1|1|C|4385
6HRM|1|1|U|4386
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain P
- 50S ribosomal protein L19
- Chain y
- 30S ribosomal protein S20
Coloring options: