IL_6HTQ_001
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_001 not in the Motif Atlas
- Homologous match to IL_7A0S_001
- Geometric discrepancy: 0.1382
- The information below is about IL_7A0S_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
6HTQ|1|A|G|24
6HTQ|1|A|U|25
6HTQ|1|A|G|26
6HTQ|1|A|G|27
6HTQ|1|A|A|28
6HTQ|1|A|U|29
6HTQ|1|A|G|30
*
6HTQ|1|A|C|556
6HTQ|1|A|U|557
6HTQ|1|A|G|558
6HTQ|1|A|A|559
6HTQ|1|A|A|560
6HTQ|1|A|A|561
6HTQ|1|A|C|562
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
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