IL_6HTQ_075

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUUGGAAA*UGGAG

Length

13 nucleotides

Bulged bases

6HTQ|1|A|G|2161

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_075 not in the Motif Atlas

Homologous match to IL_3U4M_004

Geometric discrepancy: 0.2849

The information below is about IL_3U4M_004

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

6HTQ|1|A|C|2158
6HTQ|1|A|U|2159
6HTQ|1|A|U|2160
6HTQ|1|A|G|2161
6HTQ|1|A|G|2162
6HTQ|1|A|A|2163
6HTQ|1|A|A|2164
6HTQ|1|A|A|2165
*
6HTQ|1|A|U|2184
6HTQ|1|A|G|2185
6HTQ|1|A|G|2186
6HTQ|1|A|A|2187
6HTQ|1|A|G|2188

Current chains

Chain A

23S ribosomal RNA

Nearby chains