IL_6HTQ_130
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UGAAAGCC*GAGGG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_130 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.2579
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6HTQ|1|a|U|614
6HTQ|1|a|G|615
6HTQ|1|a|A|616
6HTQ|1|a|A|617
6HTQ|1|a|A|618
6HTQ|1|a|G|619
6HTQ|1|a|C|620
6HTQ|1|a|C|621
*
6HTQ|1|a|G|637
6HTQ|1|a|A|638
6HTQ|1|a|G|639
6HTQ|1|a|G|640
6HTQ|1|a|G|641
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain h
- 30S ribosomal protein S8
- Chain p
- 30S ribosomal protein S16
- Chain q
- 30S ribosomal protein S17
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