IL_6NUO_198

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_198 not in the Motif Atlas

Homologous match to IL_4LFB_023

Geometric discrepancy: 0.1159

The information below is about IL_4LFB_023

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.7

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

14

Unit IDs

6NUO|1|XA|U|580
6NUO|1|XA|G|581
6NUO|1|XA|U|582
6NUO|1|XA|A|583
6NUO|1|XA|G|584
*
6NUO|1|XA|U|757
6NUO|1|XA|G|758
6NUO|1|XA|A|759
6NUO|1|XA|G|760
6NUO|1|XA|G|761

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XL

30S ribosomal protein S12

Chain XO

30S ribosomal protein S15

Chain XQ

30S ribosomal protein S17

Chain YA

Large subunit ribosomal RNA; LSU rRNA