IL_6OLE_170
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAG*CCAUA
- Length
- 10 nucleotides
- Bulged bases
- 6OLE|1|t|U|2051
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OLE_170 not in the Motif Atlas
- Homologous match to IL_5TBW_048
- Geometric discrepancy: 0.1009
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6OLE|1|t|U|1886
6OLE|1|t|U|1887
6OLE|1|t|A|1888
6OLE|1|t|A|1889
6OLE|1|t|G|1890
*
6OLE|1|t|C|2048
6OLE|1|t|C|2049
6OLE|1|t|A|2050
6OLE|1|t|U|2051
6OLE|1|t|A|2052
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain E
- 5S ribosomal RNA; 5S rRNA
- Chain H
- 60S ribosomal protein L7
- Chain R
- 60S ribosomal protein L18
- Chain f
- 60S ribosomal protein L32
- Chain g
- 60S ribosomal protein L35a
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