IL_6OM7_192
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGGAAUG*CGAGAGA
- Length
- 14 nucleotides
- Bulged bases
- 6OM7|1|t|U|2640, 6OM7|1|t|A|2653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_192 not in the Motif Atlas
- Homologous match to IL_5TBW_073
- Geometric discrepancy: 0.2163
- The information below is about IL_5TBW_073
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_60192.2
- Basepair signature
- cWW-tSH-tSH-tSS-tHS-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
6OM7|1|t|U|2635
6OM7|1|t|G|2636
6OM7|1|t|G|2637
6OM7|1|t|A|2638
6OM7|1|t|A|2639
6OM7|1|t|U|2640
6OM7|1|t|G|2641
*
6OM7|1|t|C|2651
6OM7|1|t|G|2652
6OM7|1|t|A|2653
6OM7|1|t|G|2654
6OM7|1|t|A|2655
6OM7|1|t|G|2656
6OM7|1|t|A|2657
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L19
- Chain SN
- 40S ribosomal protein S13
- Chain a
- 60S ribosomal protein L27
- Chain d
- 60S ribosomal protein L30
- Chain h
- 60S ribosomal protein L34
- Chain q
- 60S ribosomal protein L37a
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