IL_6OM7_258
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CCACUC*GGA(OMG)
- Length
- 10 nucleotides
- Bulged bases
- 6OM7|1|S2|G|507
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_258 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.2138
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6OM7|1|S2|C|491
6OM7|1|S2|C|492
6OM7|1|S2|A|493
6OM7|1|S2|C|494
6OM7|1|S2|U|495
6OM7|1|S2|C|496
*
6OM7|1|S2|G|506
6OM7|1|S2|G|507
6OM7|1|S2|A|508
6OM7|1|S2|OMG|509
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SY
- 40S ribosomal protein S24
Coloring options: