IL_6OST_038
3D structure
- PDB id
- 6OST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF2 pre-accommodated state bound Release complex 70S at 24ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 6OST|1|1|A|1046
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OST_038 not in the Motif Atlas
- Geometric match to IL_5TBW_054
- Geometric discrepancy: 0.2685
- The information below is about IL_5TBW_054
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90538.5
- Basepair signature
- cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6OST|1|1|C|1043
6OST|1|1|C|1044
6OST|1|1|C|1045
6OST|1|1|A|1046
6OST|1|1|G|1047
6OST|1|1|A|1048
6OST|1|1|C|1049
6OST|1|1|A|1050
6OST|1|1|G|1051
*
6OST|1|1|U|1108
6OST|1|1|C|1109
6OST|1|1|G|1110
6OST|1|1|A|1111
6OST|1|1|G|1112
Current chains
- Chain 1
- 23S Ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L6
- Chain f
- 50S ribosomal protein L36
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