IL_6OST_175

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6OST|1|1|U|846, 6OST|1|1|U|931

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OST_175 not in the Motif Atlas

Geometric match to IL_8B0X_179

Geometric discrepancy: 0.329

The information below is about IL_8B0X_179

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

6OST|1|1|A|844
6OST|1|1|A|845
6OST|1|1|U|846
6OST|1|1|U|847
6OST|1|1|C|848
*
6OST|1|1|G|930
6OST|1|1|U|931
6OST|1|1|U|932
6OST|1|1|A|933
6OST|1|1|U|934

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30