IL_6QNR_246
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_246 not in the Motif Atlas
- Homologous match to IL_5J7L_257
- Geometric discrepancy: 0.0655
- The information below is about IL_5J7L_257
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
6QNR|1|1H|C|588
6QNR|1|1H|C|589
6QNR|1|1H|U|590
*
6QNR|1|1H|A|599
6QNR|1|1H|U|600
6QNR|1|1H|G|601
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 31
- 50S ribosomal protein L4
- Chain 78
- 50S ribosomal protein L15
- Chain C8
- 50S ribosomal protein L20
- Chain D8
- 50S ribosomal protein L21
- Chain N8
- 50S ribosomal protein L32
Coloring options: