IL_6QNR_391

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_391 not in the Motif Atlas

Homologous match to IL_3U4M_001

Geometric discrepancy: 0.3367

The information below is about IL_3U4M_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

6QNR|1|14|C|2108
6QNR|1|14|U|2109
6QNR|1|14|G|2110
*
6QNR|1|14|C|2179
6QNR|1|14|U|2180
6QNR|1|14|G|2181

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 3L

Transfer RNA; tRNA

Chain 79

50S ribosomal protein L1