IL_6T59_073
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CUCAUCAG*CUGGAG
- Length
- 14 nucleotides
- Bulged bases
- 6T59|1|54|U|1930, 6T59|1|54|C|1931, 6T59|1|54|G|2055, 6T59|1|54|A|2057
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T59_073 not in the Motif Atlas
- Geometric match to IL_5TBW_051
- Geometric discrepancy: 0.1612
- The information below is about IL_5TBW_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6T59|1|54|C|1926
6T59|1|54|U|1927
6T59|1|54|C|1928
6T59|1|54|A|1929
6T59|1|54|U|1930
6T59|1|54|C|1931
6T59|1|54|A|1932
6T59|1|54|G|1933
*
6T59|1|54|C|2053
6T59|1|54|U|2054
6T59|1|54|G|2055
6T59|1|54|G|2056
6T59|1|54|A|2057
6T59|1|54|G|2058
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain H3
- uL6
- Chain M3
- Ribosomal protein L14
- Chain O3
- uL13
- Chain S3
- eL20
- Chain m3
- eL40
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