IL_6VZ7_034
3D structure
- PDB id
- 6VZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VZ7_034 not in the Motif Atlas
- Geometric match to IL_5J7L_034
- Geometric discrepancy: 0.0541
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
6VZ7|1|D|A|673
6VZ7|1|D|G|674
6VZ7|1|D|A|675
6VZ7|1|D|A|676
6VZ7|1|D|U|677
6VZ7|1|D|U|678
*
6VZ7|1|D|A|712
6VZ7|1|D|G|713
6VZ7|1|D|G|714
6VZ7|1|D|A|715
6VZ7|1|D|A|716
6VZ7|1|D|U|717
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S18
- Chain F
- 30S ribosomal protein S21
- Chain L
- 30S ribosomal protein S6
- Chain Q
- 30S ribosomal protein S11
- Chain h
- 50S ribosomal protein L2
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